Techniques

Immunofluorescence staining: & Confocal imaging

Techniques we routinely use to visualize various molecules simultaneously in Drosophila tissues. For a finer resolution, we also clear thick tissues like the fly CNS via a DPX based clearing method.

This VNC tissue was stained with antibodies against Lamin (green), a nuclear membrane protein, marks nucleus of every fly cell and Elav (magenta), an RNA binding protein, marks all neurons. Cells lacking Elav are glia. Note the difference between neuronal and glial nuclear membrane.


Fly Genetics

With the current tools available to fly researchers, we can target any gene in any cell type at any time.

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Example: Stem-cell intersected reporter immortalization. This technique employs multiple recombinases and transcriptional activators.


Calcium imaging

Excited neurons and muscles exhibit high Calcium signaling, which can be visualized with Genetically Encoded Calcium Indicators (GECI)- gCAMP6m in this case.

This video shows calcium transients of developing jump muscles, TTM in pupal stages. Neural circuits do test runs during development. We know little about the role of these immature neuronal activities on neural circuit formation. Seven pupal flies shown with their dorsal side up.

Optogenetic manipulations

Neuronal activities can be aritificially manipulated with light-gated ion channels. Light induced conformational changes of some channels (e.g., channelrhodopsins) allow cation influx, lead to rapid depolarization of the plasma membrane and neuronal activation. Similary, light gated conformational changes of chloride channels (e.g., GtACR) lead to hyperpolarization and inhibition of neurons.

Decapitated flies expressing channelrhodopsin channels in distinct neuronal lineages. Light induced activation in one lineage leads to jump behavior (left) and in another lineage it leads to movements of specific leg segments (right).


Live Imaging

Metamorphosis:  The process of transformation from an immature form to an adult form.

Majority of adult Drosophila neurons are born during larval stages. During metamorphosis, neurons make synapses with their partnering neurons to establish neural circuits that control behavior. Our understanding of how these circuits form is still limited.